Publications
2024
Polyploidisation pleiotropically buffers ageing in hepatocytes
K Yin, M Büttner, IK Deligiannis, M Strzelecki, L Zhang, C Talavera-Lopez, F Theis, DT Odom, CP Martinez-Jimenez. Journal of Hepatology, 2024
2023
E Sanchez-Quant, ML Richter,… CP Martinez-Jimenez. Genome Biology, 2023, 24 (1), 234
Multi-omics and 3D-imaging reveal bone heterogeneity and unique calvaria cells in neuroinflammation
Zeynep Ilgin Kolabas, Louis B. Kuemmerle, Robert Perneczky, Benjamin Förstera, ... Ioannis K. Deligiannis, Celia P. Martinez-Jimenez..., Ali Erturk. Cell 2023, 186 (17), 3706-3725. e29
Spatial transcriptomics using multiplexed deterministic barcoding in tissue
J Wirth, N Compera, K Yin, S Brood, S Chang, CP Martinez-Jimenez*, M. Meier*.
Nature Communications 2023, 14 (1), 1523
T Gruber, F Lechner, C Murat,..., CP Martinez-Jimenez, MH Tschoep, V Grinevich, C Garcia-Caceres.
Cell Reports 2023, 42 (10)
Luis Álvarez, Pablo-Jesús Marín-García, Pilar Rentero-Garrido, Celia Pilar Martinez-Jimenez, Lola Llobat.
Infectious Diseases of Poverty 2023, 12 (01), 62-70
2022
T Gruber, F Lechner, C Murat,..., CP Martinez-Jimenez, MH Tschoep, V Grinevich, C Garcia-Caceres.
bioRxiv, 2022.07. 20.500778
Isolation of Nuclei from Flash-frozen Liver Tissue for Single-cell Multiomics.
M Strzelecki, K Yin, C Talavera-López, CP Martinez-Jimenez.
Journal of Visualized Experiments: Jove, 2022, e64792
G Wolff, M Sakurai, A Mhamane, M Troullinaki, A Maida, IK Deligiannis, ..., S. Herzig.
Molecular Metabolism 2022, 60, 101487
Senescence-induced endothelial phenotypes underpin immune-mediated senescence surveillance
K Yin, D Patten, S Gough, S de Barros Gonçalves, A Chan, I Olan, ..., M. Hoare.
Genes & Development 36 (9-10), 533-549
Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue
J Wirth, N Compera, K Yin, S Brood, S Chang, CP Martinez-Jimenez, M. Meier.
bioRxiv
E Sanchez-Quant, ML Richter, M Colome-Tatche, CP Martinez-Jimenez
bioRxiv
P Erdoesi, M Buettner, M Meyer-Bender, R Kamies, IK Deligiannis, ..., S. Hammad.
Zeitschrift für Gastroenterologie 60 (01), P 1.21
2021
Single-nucleus RNA-seq2 reveals functional crosstalk between liver zonation and ploidy
ML Richter, IK Deligiannis, K Yin, A Danese, E Lleshi, P Coupland, ... CP. Martinez-Jimenez.
Nature communications 12 (1), 1-16
2020
Advances of single-cell genomics and epigenomics in human disease: where are we now?
R Kamies, CP Martinez-Jimenez
Mammalian Genome 31 (5), 170-180
2019
HC Chen, N Eling, CP Martinez‐Jimenez, LMN O'Brien, V Carbonaro, ..., M. de la Roche.
EMBO reports 20 (8), e47379
Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis
C Ernst, N Eling, CP Martinez-Jimenez, JC Marioni, DT Odom
Nature communications 10 (1), 1-20
2017
Aging increases cell-to-cell transcriptional variability upon immune stimulation
CP Martinez-Jimenez, N Eling, HC Chen, CA Vallejos, AA Kolodziejczyk, ... DT Odom.
Science 355 (6332), 1433-1436
Inactivation of the nuclear orphan receptor COUP-TFII by small chemicals
R Le Guével, F Oger, CP Martinez-Jimenez, M Bizot, C Gheeraert, ..., G. Salbert.
ACS chemical biology 12 (3), 654-663
J Calvo-Lerma, CP Martinez-Jimenez, JP Lázaro-Ramos, A Andrés, ..., C. Ribes.
BMJ open 7 (3), e014931
2016
The mechanisms shaping the single-cell transcriptional landscape
CP Martinez-Jimenez, DT Odom
Current Opinion in Genetics & Development 37, 27-35
2015
Epigenetic crosstalk: a molecular language in human metabolic disorders
CP Martinez-Jimenez, J Sandoval
Frontiers in Bioscience-Scholar 7 (1), 46-57